MMPBSA calculation using .dcd trajectories Link Here

This tutorial takes the user through the file conversion steps to generate the gromacs compatible files to perform protein-ligand or protein-protein interactions using g_mmpbsa , gmx mmpbsa, gmmpsa etc"

Common Trajectory Analysis Commands [Gromacs] Link Here

Common Gromacs Simulation Trajectory Analysis Commands

Basic pymol tutorials for beginners Link Here